comEA protein (Bacillus clausii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Coexpression

Experiments

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[Homology]

Score

comEA

Late competence protein ComEA. (204 aa)

Predicted Functional Partners:

comEC

0.933

comGA

0.895

comFA

0.894

comGB

0.822

comEB

0.745

comC

0.707

comGC

0.684

recA

0.658

comER

0.657

comFC

0.549

Your Current Organism:

Bacillus clausii

NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
comC	comEA	ABC2619	ABC1646	Late competence protein ComC.	Late competence protein ComEA.	0.707
comC	comEC	ABC2619	ABC1648	Late competence protein ComC.	Late competence protein ComEC.	0.776
comC	comFA	ABC2619	ABC3084	Late competence protein ComC.	Late competence protein ComFA.	0.533
comC	comFC	ABC2619	ABC3083	Late competence protein ComC.	Late competence protein ComFC.	0.457
comC	comGA	ABC2619	ABC2508	Late competence protein ComC.	Late competence protein ComGA.	0.898
comC	comGB	ABC2619	ABC2507	Late competence protein ComC.	Late competence protein ComGB.	0.911
comC	comGC	ABC2619	ABC2505	Late competence protein ComC.	Late competence protein ComGC; Required for transformation and DNA binding.	0.879
comEA	comC	ABC1646	ABC2619	Late competence protein ComEA.	Late competence protein ComC.	0.707
comEA	comEB	ABC1646	ABC1647	Late competence protein ComEA.	Late competence protein ComEB.	0.745
comEA	comEC	ABC1646	ABC1648	Late competence protein ComEA.	Late competence protein ComEC.	0.933
comEA	comER	ABC1646	ABC1645	Late competence protein ComEA.	Late competence protein ComER.	0.657
comEA	comFA	ABC1646	ABC3084	Late competence protein ComEA.	Late competence protein ComFA.	0.894
comEA	comFC	ABC1646	ABC3083	Late competence protein ComEA.	Late competence protein ComFC.	0.549
comEA	comGA	ABC1646	ABC2508	Late competence protein ComEA.	Late competence protein ComGA.	0.895
comEA	comGB	ABC1646	ABC2507	Late competence protein ComEA.	Late competence protein ComGB.	0.822
comEA	comGC	ABC1646	ABC2505	Late competence protein ComEA.	Late competence protein ComGC; Required for transformation and DNA binding.	0.684
comEA	recA	ABC1646	ABC2199	Late competence protein ComEA.	Recombination protein A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.	0.658
comEB	comEA	ABC1647	ABC1646	Late competence protein ComEB.	Late competence protein ComEA.	0.745
comEB	comEC	ABC1647	ABC1648	Late competence protein ComEB.	Late competence protein ComEC.	0.895
comEB	comER	ABC1647	ABC1645	Late competence protein ComEB.	Late competence protein ComER.	0.509