Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
comEALate competence protein ComEA. (204 aa)    
Predicted Functional Partners:
comEC
Late competence protein ComEC.
 
  
 0.975
comFA
Late competence protein ComFA.
   
  
 0.951
comGA
Late competence protein ComGA.
  
  
 0.950
comEB
Late competence protein ComEB.
  
  
 0.930
comGB
Late competence protein ComGB.
  
  
 0.913
comGC
Late competence protein ComGC; Required for transformation and DNA binding.
   
  
 0.868
comC
Late competence protein ComC.
   
  
 0.867
recA
Recombination protein A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
     
 0.754
comER
Late competence protein ComER.
     
 0.737
ABC2526
Competence protein/transcription factor.
   
  
 0.720
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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