STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABC1673Hypothetical protein. (184 aa)    
Predicted Functional Partners:
ABC1672
Conserved hypothetical protein.
  
  
 0.972
ABC1671
Conserved hypothetical protein.
  
  
 0.939
ABC1674
Conserved hypothetical protein.
     
 0.677
ABC1670
Conserved hypothetical protein.
       0.633
ABC1712
Conserved hypothetical protein.
  
  
 0.597
ABC1675
Stage IV sporulation protein.
     
 0.576
phoH
Phosphate starvation-induced protein PhoH.
       0.570
ABC3949
Flotillin-like protein.
   
    0.543
rpsU
30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.
       0.525
ABC1677
Conserved hypothetical protein.
       0.512
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.