STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC1692S-adenosylmethionine (SAM)-dependent methyltransferase. (261 aa)    
Predicted Functional Partners:
ABC1693
Conserved hypothetical protein; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.
  
 0.972
ABC1691
Cytochrome c551.
       0.768
ABC2295
Conserved hypothetical protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.
  
     0.745
ABC1593
Conserved hypothetical protein; Belongs to the UPF0297 family.
  
     0.715
ABC2801
Polysaccharide biosynthesis.
  
     0.702
whiA
Conserved hypothetical protein; Involved in cell division and chromosome segregation.
  
     0.697
mrnC
Conserved hypothetical protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.
  
     0.660
ABC2229
L7AE family ribosomal protein.
  
     0.611
ABC2325
Fibronectin/fibrinogen-binding protein.
 
     0.570
ABC2230
Conserved hypothetical protein.
  
   
 0.569
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.