STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC1706Conserved hypothetical protein; Belongs to the 5'(3')-deoxyribonucleotidase family. (194 aa)    
Predicted Functional Partners:
ABC1707
Conserved hypothetical protein.
       0.701
hpr
Transcriptional repressor of sporulation and extracellular protein; Negative regulator of protease production and sporulation.
  
     0.624
ABC2880
Peptidase.
  
     0.552
ABC0692
Conserved hypothetical protein.
  
     0.531
ribG
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
    0.529
ABC3885
Conserved hypothetical protein.
  
     0.525
ABC1471
Conserved hypothetical protein.
  
     0.519
ABC2155
Conserved hypothetical protein.
  
     0.503
ABC1305
Conserved hypothetical protein.
  
     0.470
ABC1711
Conserved hypothetical protein.
  
     0.464
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.