STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC1716Major facilitator (MFS) superfamily protein. (430 aa)    
Predicted Functional Partners:
ABC1510
propionyl-CoA carboxylase beta chain.
  
 0.867
ABC2572
propionyl-CoA carboxylase beta chain.
  
 0.867
accB
acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
  
 
 0.840
spoIIIAF
Stage III sporulation protein AF.
 
    0.782
ABC1560
Conserved hypothetical protein.
  
    0.772
ABC0010
Conserved hypothetical protein.
  
     0.769
ABC2626
Stage VI sporulation protein D.
  
     0.769
ABC0097
Conserved hypothetical protein.
  
     0.768
ABC2053
Conserved hypothetical protein.
  
     0.767
ABC2484
Conserved hypothetical protein.
  
     0.764
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.