STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC1742Esterase. (243 aa)    
Predicted Functional Partners:
ABC1741
2'-5' RNA ligase; Belongs to the 2H phosphoesterase superfamily. YjcG family.
 
  
 0.883
ABC1740
GNAT family acetyltransferase.
  
    0.766
ABC2112
Conserved hypothetical protein.
  
     0.589
ABC1743
Conserved hypothetical protein.
       0.580
ABC2046
Thioredoxin.
  
     0.552
ABC1921
GNAT family acetyltransferase.
  
    0.531
ABC2380
Conserved hypothetical protein.
   
    0.509
ABC2379
Conserved hypothetical protein.
  
     0.491
bdbC
Disulfide formation protein; Required for disulfide bond formation in some proteins. Belongs to the DsbB family. BdbC subfamily.
  
     0.453
ABC3112
Conserved hypothetical protein.
  
     0.449
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.