Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
resBCytochrome c biogenesis protein ResB. (544 aa)    
Predicted Functional Partners:
resC
Cytochrome c biogenesis protein ResC.
 
  
 0.993
resA
Thiol-disulfide oxidoreductase ResA; Thiol-disulfide oxidoreductase which is required in disulfide reduction during c-type cytochrome synthesis. May accept reducing equivalents from CcdA, leading to breakage of disulfide bonds in apocytochrome c; following this reduction heme can be covalently attached (By similarity).
  
  
 0.968
hemX
Negative effector of the concentration of HemA.
 
  
 0.872
ABC1691
Cytochrome c551.
 
  
 0.853
ABC0230
Conserved hypothetical protein.
  
    0.823
cccB
Cytochrome c551.
 
  
 0.811
ABC4008
Conserved hypothetical protein.
  
    0.806
resE
Two-component sensor histidine kinase.
 
    0.786
qcrC
Menaquinol-cytochrome c reductase cytochrome b/c subunit; Component of the menaquinol-cytochrome c reductase complex.
  
   
 0.775
ABC1881
Conserved hypothetical protein.
  
     0.773
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.