STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
resCCytochrome c biogenesis protein ResC. (399 aa)    
Predicted Functional Partners:
resB
Cytochrome c biogenesis protein ResB.
 
  
 0.993
resA
Thiol-disulfide oxidoreductase ResA; Thiol-disulfide oxidoreductase which is required in disulfide reduction during c-type cytochrome synthesis. May accept reducing equivalents from CcdA, leading to breakage of disulfide bonds in apocytochrome c; following this reduction heme can be covalently attached (By similarity).
  
  
 0.958
resE
Two-component sensor histidine kinase.
 
  
 0.844
ABC0230
Conserved hypothetical protein.
  
    0.810
qcrB
Menaquinol-cytochrome c reductase cytochrome b subunit.
  
  
 0.809
qcrC
Menaquinol-cytochrome c reductase cytochrome b/c subunit; Component of the menaquinol-cytochrome c reductase complex.
  
  
 0.796
ABC1691
Cytochrome c551.
 
  
 0.779
ABC4008
Conserved hypothetical protein.
  
    0.755
ABC2500
Conserved hypothetical protein.
  
     0.748
ABC1881
Conserved hypothetical protein.
  
     0.743
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.