STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC1866Conserved hypothetical protein. (54 aa)    
Predicted Functional Partners:
ABC2561
Conserved hypothetical protein.
  
     0.709
ABC2036
Tellurite resistance protein; Belongs to the TelA family.
  
     0.684
ABC1274
Conserved hypothetical protein.
  
     0.668
ABC2447
Conserved hypothetical protein.
  
     0.632
ABC3896
Conserved hypothetical protein.
  
     0.626
ABC2935
Conserved hypothetical protein.
  
     0.595
cssS
Two-component sensor histidine kinase.
  
     0.589
prsW
Conserved hypothetical protein; Involved in the degradation of specific anti-sigma factors. Responsible for Site-1 cleavage of the RsiW anti-sigma factor. This results, after two other proteolytic steps catalyzed by the RasP and ClpXP proteases, in the release of SigW and the transcription activation of the genes under the control of the sigma-W factor (By similarity).
       0.571
ABC3828
Conserved hypothetical protein.
  
     0.531
ABC1321
Conserved hypothetical protein.
  
     0.528
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.