STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC1879Conserved hypothetical protein. (88 aa)    
Predicted Functional Partners:
ABC2384
Conserved hypothetical protein.
  
    0.778
ABC2536
Conserved hypothetical protein; Belongs to the UPF0736 family.
  
     0.770
ABC1562
Conserved hypothetical protein.
  
    0.769
ABC2726
Conserved hypothetical protein.
  
   
 0.763
sspI
Small acid-soluble spore protein; Belongs to the SspI family.
  
     0.758
ABC2511
Spore coat protein.
  
    0.756
ABC0806
Conserved hypothetical protein.
  
     0.748
fliJ
Flagellar FliJ protein.
  
     0.744
ABC1696
Conserved hypothetical protein.
  
    0.730
ABC2484
Conserved hypothetical protein.
  
     0.730
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.