STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC1905Conserved hypothetical protein; Belongs to the UPF0302 family. (181 aa)    
Predicted Functional Partners:
ABC1904
Conserved hypothetical protein.
 
  
 0.658
ABC1906
Conserved hypothetical protein.
     
 0.636
ABC3376
Conserved hypothetical protein.
  
     0.602
ABC2677
Conserved hypothetical protein.
  
     0.555
ABC1915
Pyrophosphatase.
 
     0.547
ABC2399
Conserved hypothetical protein.
  
     0.516
ABC1726
Conserved hypothetical protein.
  
    0.509
ABC2766
General stress protein.
  
  
 0.491
ABC0054
Conserved hypothetical protein; Involved in initiation control of chromosome replication. Belongs to the YabA family.
  
     0.489
ABC3039
Conserved hypothetical protein.
  
     0.482
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.