STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC1905Conserved hypothetical protein; Belongs to the UPF0302 family. (181 aa)    
Predicted Functional Partners:
ABC1904
Conserved hypothetical protein.
 
  
 0.740
ABC1906
Conserved hypothetical protein.
     
 0.727
qcrA
Menaquinol-cytochrome c reductase iron-sulfur subunit.
     
 0.611
ABC3376
Conserved hypothetical protein.
  
     0.602
ABC2677
Conserved hypothetical protein.
  
     0.555
ABC1915
Pyrophosphatase.
 
     0.549
qcrB
Menaquinol-cytochrome c reductase cytochrome b subunit.
     
 0.544
tyrA
Prephenate dehydrogenase.
       0.543
hisC
Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
       0.534
ABC1912
Zn-dependent protease.
  
    0.519
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.