Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
qcrAMenaquinol-cytochrome c reductase iron-sulfur subunit. (163 aa)    
Predicted Functional Partners:
qcrB
Menaquinol-cytochrome c reductase cytochrome b subunit.
 
 0.999
qcrC
Menaquinol-cytochrome c reductase cytochrome b/c subunit; Component of the menaquinol-cytochrome c reductase complex.
 
 0.999
ctaC
Cytochrome caa3 oxidase subunit II CoxB; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 0.999
ctaE
Cytochrome caa3 oxidase subunit III CoxC.
 
 
 0.967
ABC1691
Cytochrome c551.
 
 
 0.964
cccB
Cytochrome c551.
 
 
 0.958
ctaD
Cytochrome caa3 oxidase subunit I CoxA; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
 
 0.945
sdhB
Succinate dehydrogenase iron-sulfur protein.
 
 
 0.930
qoxC
Cytochrome aa3 quinol oxidase subunit III QoxC.
  
 
 0.913
qoxB
Cytochrome aa3 quinol oxidase subunit I QoxB; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.881
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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