STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC1934Cobalt ABC transporter ATP-binding protein. (489 aa)    
Predicted Functional Partners:
ABC1935
Cobalt ABC transporter permease.
 
 0.994
ABC1933
Conserved hypothetical protein.
 
  
 0.977
ABC0181
Cobalt ABC transporter permease.
 
 0.824
ABC1936
3-methyladenine DNA glycosylase; Belongs to the DNA glycosylase MPG family.
       0.644
ABC1937
Lysine decarboxylase; Belongs to the LOG family.
       0.536
hxlB
6-phospho-3-hexuloisomerase.
  
     0.451
ABC1932
HAD superfamily hydrolase.
       0.448
ABC1931
Branched-chain amino acid aminotransferase.
  
    0.430
ABC2094
Conserved hypothetical protein.
   
    0.403
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.