STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC1980Conserved hypothetical protein. (74 aa)    
Predicted Functional Partners:
ABC2211
Conserved hypothetical protein.
  
     0.618
ABC0262
Multidrug ABC transporter permease.
  
     0.587
ABC1436
Multidrug ABC transporter permease.
  
     0.583
ABC1435
Multidrug ABC transporter permease.
  
     0.570
ABC2618
Hypothetical protein.
  
     0.547
ABC0620
Conserved hypothetical protein.
  
     0.522
ABC0211
GNAT family acetyltransferase.
  
     0.521
ABC1095
Conserved hypothetical protein.
  
     0.495
ABC1981
Conserved hypothetical protein.
       0.493
ABC1979
Conserved hypothetical protein.
  
    0.490
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.