STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC1991Proline/glycine betaine ABC transporter permease. (524 aa)    
Predicted Functional Partners:
ABC1992
Proline/glycine betaine ABC transporter ATP-binding protein.
 
 0.999
opuCA
Proline/glycine betaine ABC transporter ATP-binding protein.
 
 0.998
opuCC
Proline/glycine betaine ABC transporter substrate-binding protein.
 
 
0.963
opuCB
Proline/glycine betaine ABC transporter permease.
 
 
0.960
opuCD
Proline/glycine betaine ABC transporter permease.
 
 
0.958
ABC1990
Conserved hypothetical protein.
       0.832
gid
Glucose inhibited division protein Gid; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily.
      
 0.616
opuAA
Glycine betaine ABC transporter ATP-binding protein.
 
  
 0.603
opuAB
Glycine betaine ABC transporter permease.
 
 
0.597
ABC0794
Conserved hypothetical protein.
  
    0.578
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
Server load: low (20%) [HD]