Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABC1996Conserved hypothetical protein; Belongs to the HesB/IscA family. (102 aa)    
Predicted Functional Partners:
ABC1995
Carboxypeptidase; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues.
 
     0.744
ABC1564
Conserved hypothetical protein.
  
     0.677
ABC2447
Conserved hypothetical protein.
  
     0.670
ABC2638
Conserved hypothetical protein.
  
     0.661
ABC0909
Conserved hypothetical protein.
  
     0.659
cssS
Two-component sensor histidine kinase.
  
     0.652
ABC2935
Conserved hypothetical protein.
  
     0.643
spo0B
Stage 0 sporulation protein B.
  
     0.633
ABC3490
Conserved hypothetical protein.
  
     0.616
ABC2533
HAD superfamily hydrolase.
  
     0.578
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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