STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC2026Conserved hypothetical protein. (320 aa)    
Predicted Functional Partners:
ABC2025
Esterase.
  
 0.996
ABC4022
Glyoxylase.
  
  
 0.833
ABC1713
Oxidoreductase.
 
  
 0.788
ABC0839
Conserved hypothetical protein.
 
  
 0.748
ABC0738
MarR family transcriptional regulator.
 
   
 0.681
ABC3829
Nuclease inhibitor.
     
 0.638
ABC3972
Conserved hypothetical protein.
 
    0.555
ABC2024
Conserved hypothetical protein.
       0.537
ABC3767
NAD(P)H nitroreductase.
  
  
 0.487
ABC2027
Hypothetical protein.
       0.470
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.