STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC2033Conserved hypothetical protein. (203 aa)    
Predicted Functional Partners:
ABC3838
Conserved hypothetical protein.
  
     0.701
ABC2399
Conserved hypothetical protein.
  
     0.700
ABC2684
Conserved hypothetical protein.
  
     0.643
ABC2166
Site-specific recombinase.
  
     0.614
ABC0802
Sulfatase; Belongs to the LTA synthase family.
  
     0.581
gltB
Glutamate synthase small subunit.
       0.567
ABC2797
DeoR family transcriptional regulator.
  
     0.567
ABC3906
Conserved hypothetical protein.
  
     0.560
ABC2061
Conserved hypothetical protein.
  
     0.557
ABC2032
Conserved hypothetical protein.
       0.544
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.