STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC2051Conserved hypothetical protein. (124 aa)    
Predicted Functional Partners:
ABC3885
Conserved hypothetical protein.
  
     0.735
ABC1465
Conserved hypothetical protein.
  
     0.729
ABC2521
Conserved hypothetical protein; Belongs to the UPF0738 family.
  
     0.725
ABC2561
Conserved hypothetical protein.
  
     0.715
hpr
Transcriptional repressor of sporulation and extracellular protein; Negative regulator of protease production and sporulation.
  
     0.712
ABC2036
Tellurite resistance protein; Belongs to the TelA family.
  
     0.700
racA
Transcriptional regulator; Required for the formation of axial filaments and for anchoring the origin regions at the cell poles in sporulating cells, thus ensuring proper chromosome segregation in the prespore. Binds in a dispersed manner throughout the chromosome but preferentially to sites clustered in the origin portion of the chromosome, causing condensation of the chromosome and its remodeling into an elongated, anchored structure; Belongs to the RacA family.
  
    0.693
ABC1911
Conserved hypothetical protein.
  
     0.668
ABC2018
Exonuclease.
 
     0.665
ABC2638
Conserved hypothetical protein.
  
     0.658
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.