STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC2103Conserved hypothetical protein. (116 aa)    
Predicted Functional Partners:
ABC2104
Conserved hypothetical protein.
 
    0.978
ABC1741
2'-5' RNA ligase; Belongs to the 2H phosphoesterase superfamily. YjcG family.
  
     0.721
ABC0230
Conserved hypothetical protein.
  
     0.602
ABC2105
5'-3' exonuclease.
       0.599
ABC3902
Conserved hypothetical protein.
  
     0.591
ABC2923
Conserved hypothetical protein.
  
     0.579
cccB
Cytochrome c551.
  
     0.532
ABC1305
Conserved hypothetical protein.
  
     0.524
ABC3944
Thioredoxin.
  
   
 0.505
ABC2500
Conserved hypothetical protein.
  
     0.500
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.