STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC2110Oxidoreductase. (274 aa)    
Predicted Functional Partners:
prkA
Serine protein kinase.
   
    0.626
ABC2695
Oxidoreductase.
 
 
 0.541
iolS
Oxidoreductase.
 
 
0.511
ABC2109
ATP-dependent DNA helicase RecS.
       0.477
ABC2606
Oxidoreductase.
 
 
0.476
ABC2111
ABC transporter ATP-binding protein.
  
    0.465
ABC2439
Nucleoside-diphosphate-sugar epimerase.
 
 
 0.462
ABC3387
Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
   
 
 0.454
ABC2118
Conserved hypothetical protein.
  
  
 0.450
divIVA
Cell-division initiation protein DivIVA.
   
    0.446
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.