STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC2118Conserved hypothetical protein. (148 aa)    
Predicted Functional Partners:
ABC2119
DNA topoisomerase IA TopB.
       0.785
ABC3719
ThiJ/PfpI family intracellular protease.
 
  
 0.560
dps
General stress protein 20U Dps; Belongs to the Dps family.
  
  
 0.558
ABC2120
Hypothetical protein.
       0.539
ABC3339
Conserved hypothetical protein.
  
    0.539
gsiB
General stress protein B.
  
    0.539
ABC3308
Conserved hypothetical protein.
 
    0.516
ABC2326
Conserved hypothetical protein.
  
     0.488
ABC0905
Conserved hypothetical protein.
  
     0.485
ABC3162
Hypothetical protein.
  
  
 0.482
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.