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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC2121Multidrug ABC transporter ATP-binding protein. (365 aa)    
Predicted Functional Partners:
ABC3186
Multidrug ABC transporter permease.
 
  
 0.926
ABC2123
Multidrug ABC transporter permease.
 
     0.903
ABC2122
Multidrug ABC transporter permease.
  
  
 0.824
ABC2124
Two-component sensor histidine kinase.
 
    0.788
ABC2125
Two-component response regulator.
 
    0.695
ABC2120
Hypothetical protein.
       0.533
ABC1047
Multidrug ABC transporter permease.
 
  
 0.499
ABC1048
Multidrug ABC transporter permease.
 
  
 0.497
ABC1971
Conserved hypothetical protein.
 
 
 0.465
ABC1481
Multidrug ABC transporter permease.
  
 0.455
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.