STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC2121Multidrug ABC transporter ATP-binding protein. (365 aa)    
Predicted Functional Partners:
ABC3186
Multidrug ABC transporter permease.
 
  
 0.933
ABC2123
Multidrug ABC transporter permease.
 
     0.903
ABC2122
Multidrug ABC transporter permease.
  
    0.827
ABC2124
Two-component sensor histidine kinase.
 
     0.783
ABC2125
Two-component response regulator.
 
    0.694
ABC1048
Multidrug ABC transporter permease.
 
  
 0.562
ABC1047
Multidrug ABC transporter permease.
 
  
 0.561
ABC2120
Hypothetical protein.
       0.533
ABC1481
Multidrug ABC transporter permease.
 
  
 0.521
ABC1436
Multidrug ABC transporter permease.
 
  
 0.498
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.