STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC2139Lipase. (388 aa)    
Predicted Functional Partners:
msrA-2
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
       0.764
ABC2439
Nucleoside-diphosphate-sugar epimerase.
  
 
 0.729
ABC3946
Rieske [2Fe-2S] iron-sulfur protein.
 
   0.695
ABC2141
Conserved hypothetical protein; Belongs to the HesB/IscA family.
       0.566
ABC0343
medium-chain-fatty-acid--CoA ligase.
 
 
 0.560
qcrA
Menaquinol-cytochrome c reductase iron-sulfur subunit.
   
   0.529
ABC2036
Tellurite resistance protein; Belongs to the TelA family.
  
     0.481
ABC1950
Hypothetical protein.
   
 
 0.477
ABC1951
Conserved hypothetical protein.
   
 
 0.477
acpA
Acyl carrier protein ACP; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
   
 
 0.477
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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