STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC2152Thioesterase. (140 aa)    
Predicted Functional Partners:
nadE
Glutamine-hydrolyzing NAD(+) synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.
       0.617
fabD
Malonyl CoA-acyl carrier protein transacylase.
 
  
 0.515
ABC2153
Stage V sporulation protein K.
       0.493
ABC2990
3-hydroxyacyl-CoA dehydrogenase.
  
  
 0.445
ABC2154
Hypothetical protein.
       0.437
ABC2155
Conserved hypothetical protein.
       0.437
ABC1950
Hypothetical protein.
  
 
 0.410
ABC1951
Conserved hypothetical protein.
  
 
 0.410
acpA
Acyl carrier protein ACP; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
  
 
 0.410
ABC2150
Conserved hypothetical protein.
       0.409
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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