STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC2166Site-specific recombinase. (220 aa)    
Predicted Functional Partners:
ABC2165
Conserved hypothetical protein.
  
  
 0.670
ABC2684
Conserved hypothetical protein.
  
     0.659
ABC2061
Conserved hypothetical protein.
  
     0.640
ABC2033
Conserved hypothetical protein.
  
     0.614
ABC2147
Conserved hypothetical protein.
  
     0.608
ABC1530
Conserved hypothetical protein.
  
    0.583
ABC1845
Conserved hypothetical protein.
  
     0.549
spo0B
Stage 0 sporulation protein B.
  
     0.541
ABC2703
Conserved hypothetical protein.
  
     0.523
rsiW
Anti-sigma factor; Is the anti-sigma factor for SigW. The presence of RsiW leads to the inactivation of SigW, and its proteolytic destruction to sigma-W activation (By similarity); Belongs to the zinc-associated anti-sigma factor (ZAS) superfamily. Anti-sigma-W factor family.
  
     0.519
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.