STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC2203Conserved hypothetical protein. (296 aa)    
Predicted Functional Partners:
pgsA
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
    0.971
ABC2204
Conserved hypothetical protein.
  
    0.941
mreB
Rod shape-determining protein MreB.
 
 
 0.906
mbl
Cell shape determining protein.
 
 
 0.902
mreBH
Cell-shape determining protein.
 
 
 0.897
pbpA
Penicillin-binding protein.
  
 
 0.844
cinA
Competence/damage-inducible protein CinA; Belongs to the CinA family.
  
    0.829
mreC
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
 
 
 
 0.716
ABC3102
Hypothetical protein.
  
    0.691
ABC2205
Conserved hypothetical protein.
       0.628
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.