STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC2379Conserved hypothetical protein. (125 aa)    
Predicted Functional Partners:
ABC2112
Conserved hypothetical protein.
  
     0.745
ABC2905
Conserved hypothetical protein.
  
     0.653
ABC3885
Conserved hypothetical protein.
  
     0.650
ABC2397
Conserved hypothetical protein.
  
     0.635
ABC2455
Conserved hypothetical protein.
  
     0.613
ABC1305
Conserved hypothetical protein.
  
     0.592
ABC1323
Conserved hypothetical protein.
  
     0.549
ABC2923
Conserved hypothetical protein.
  
     0.523
ABC3944
Thioredoxin.
  
     0.511
ABC1741
2'-5' RNA ligase; Belongs to the 2H phosphoesterase superfamily. YjcG family.
  
     0.498
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.