STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC2397Conserved hypothetical protein. (170 aa)    
Predicted Functional Partners:
ABC1691
Cytochrome c551.
 
 
 
 0.888
cccB
Cytochrome c551.
 
 
 
 0.860
ctaC
Cytochrome caa3 oxidase subunit II CoxB; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 
 0.860
resB
Cytochrome c biogenesis protein ResB.
 
     0.774
qcrC
Menaquinol-cytochrome c reductase cytochrome b/c subunit; Component of the menaquinol-cytochrome c reductase complex.
  
   
 0.774
ABC2455
Conserved hypothetical protein.
  
     0.773
ABC1305
Conserved hypothetical protein.
  
     0.772
ABC1906
Conserved hypothetical protein.
  
     0.768
ABC1323
Conserved hypothetical protein.
  
     0.767
ABC1881
Conserved hypothetical protein.
  
     0.767
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.