STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC2400Conserved hypothetical protein. (111 aa)    
Predicted Functional Partners:
ABC2401
Tyrosine phosphorylated protein A.
  
    0.800
ABC1906
Conserved hypothetical protein.
  
    0.779
ABC1323
Conserved hypothetical protein.
  
     0.773
ABC2387
Conserved hypothetical protein.
  
     0.773
kbaA
KinB signaling pathway activation protein; Involved in the activation of the KinB signaling pathway of sporulation.
  
     0.772
ABC2455
Conserved hypothetical protein.
  
     0.772
ABC2500
Conserved hypothetical protein.
  
     0.772
ABC2923
Conserved hypothetical protein.
  
     0.772
ABC1691
Cytochrome c551.
  
     0.770
ABC1881
Conserved hypothetical protein.
  
     0.770
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.