STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABC2414Oligopeptide ABC transporter substrate-binding protein. (585 aa)    
Predicted Functional Partners:
ABC2413
Oligopeptide ABC transporter permease.
 
 
 0.928
ABC2412
Oligopeptide ABC transporter permease.
 
 
 0.904
ABC3092
Oligopeptide ABC transporter permease.
 
 
 0.850
ABC3091
Oligopeptide ABC transporter permease.
 
 
 0.834
ABC1241
Oligopeptide ABC transporter permease.
 
 
 0.771
ABC1242
Oligopeptide ABC transporter permease.
 
 
 0.762
ABC4065
Oligopeptide ABC transporter permease.
 
 
 0.748
ABC3660
Oligopeptide ABC transporter permease.
 
 
 0.743
ABC0031
Oligopeptide ABC transporter permease.
 
 
 0.720
ABC1609
Oligopeptide ABC transporter permease.
 
 
 0.719
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.