STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC2426Trk family potassium transport system NAD-binding component. (220 aa)    
Predicted Functional Partners:
ABC2665
Na+-transporting ATP synthase.
 
 
 0.985
ABC2317
RNA-binding protein Sun; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
   0.710
ABC2427
Conserved hypothetical protein.
  
   0.708
moaE
Molybdopterin converting factor subunit 2 MoaE.
   
    0.627
ABC2428
2-cys peroxiredoxin.
  
  
 0.578
ABC1413
Selenocysteine synthase [seryl-tRNASer selenium transferase].
   
    0.492
ABC0615
uroporphyrin-III C-methyltransferase.
  
    0.466
nasF
uroporphyrin-III C-methyltransferase.
  
    0.466
ABC0051
Conserved hypothetical protein.
     
 0.454
ABC2429
Mechanosensitive ion channel.
     
 0.446
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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