Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABC24282-cys peroxiredoxin. (181 aa)    
Predicted Functional Partners:
ABC2427
Conserved hypothetical protein.
 
 0.961
ABC3387
Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
   
 
 0.804
trxB
Thioredoxin reductase.
  
 
 0.793
bsaA
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
   
 
 0.769
ABC0932
Conserved hypothetical protein.
  
 0.766
ABC2046
Thioredoxin.
  
 0.766
perR
Fur family transcriptional regulator; Belongs to the Fur family.
  
  
 0.742
ABC2411
Conserved hypothetical protein.
  
 0.742
ABC0680
Molecular chaperone HscC; Belongs to the heat shock protein 70 family.
   
 
 0.731
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
 
 0.731
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
Server load: low (16%) [HD]