STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bkdA2Branched-chain alpha-keto acid dehydrogenase E1 component beta chain. (327 aa)    
Predicted Functional Partners:
bkdB
Branched-chain alpha-keto acid dehydrogenase E2 component.
 
 0.999
bkdA1
Branched-chain alpha-keto acid dehydrogenase E1 component alpha chain.
 0.999
lpd
Branched-chain alpha-keto acid dehydrogenase E3 component.
 
 0.998
pdhA
Pyruvate dehydrogenase E1 component alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3).
 0.996
acoA
Acetoin dehydrogenase E1 component alpha subunit.
 0.996
bcd
Leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.994
pdhD
Pyruvate dehydrogenase E3 component.
 
 0.986
acoL
Acetoin dehydrogenase E3 component.
 
 0.982
pdhC
Pyruvate dehydrogenase E2 component.
 
 0.974
acoC
Acetoin dehydrogenase E2 component.
 
 0.974
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.