STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bkdA1Branched-chain alpha-keto acid dehydrogenase E1 component alpha chain. (333 aa)    
Predicted Functional Partners:
bkdB
Branched-chain alpha-keto acid dehydrogenase E2 component.
 
 0.999
bkdA2
Branched-chain alpha-keto acid dehydrogenase E1 component beta chain.
 0.999
lpd
Branched-chain alpha-keto acid dehydrogenase E3 component.
 
 
 0.997
pdhB
Pyruvate dehydrogenase E1 component beta subunit.
 0.996
acoB
Acetoin dehydrogenase E1 component beta subunit.
 0.996
bcd
Leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.995
pdhD
Pyruvate dehydrogenase E3 component.
 
 
 0.974
acoL
Acetoin dehydrogenase E3 component.
 
 
 0.972
acoC
Acetoin dehydrogenase E2 component.
 
 0.914
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
   
 
 0.912
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.