STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bkdA1Branched-chain alpha-keto acid dehydrogenase E1 component alpha chain. (333 aa)    
Predicted Functional Partners:
bkdB
Branched-chain alpha-keto acid dehydrogenase E2 component.
 
 0.999
bkdA2
Branched-chain alpha-keto acid dehydrogenase E1 component beta chain.
 0.999
lpd
Branched-chain alpha-keto acid dehydrogenase E3 component.
 
 
 0.999
bcd
Leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.999
pdhB
Pyruvate dehydrogenase E1 component beta subunit.
 0.997
acoB
Acetoin dehydrogenase E1 component beta subunit.
 0.997
pdhD
Pyruvate dehydrogenase E3 component.
 
 
 0.968
acoL
Acetoin dehydrogenase E3 component.
 
 
 0.966
acoC
Acetoin dehydrogenase E2 component.
 
 0.926
pdhC
Pyruvate dehydrogenase E2 component.
 
 0.922
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.