STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spoIIIAGStage III sporulation protein AG. (220 aa)    
Predicted Functional Partners:
spoIIIAH
Stage III sporulation protein AH.
 
  
 0.992
spoIIIAF
Stage III sporulation protein AF.
 
  
 0.984
spoIIIAE
Stage III sporulation protein AE.
 
  
 0.982
spoIIIAA
Stage III sporulation protein AA.
 
  
 0.975
spoIIIAB
Stage III sporulation protein AB.
 
  
 0.952
spoIIIAD
Stage III sporulation protein AD.
 
  
 0.951
spoIIIAC
Stage III sporulation protein AC.
 
  
 0.921
spoIIID
Stage III sporulation protein D.
  
  
 0.819
spoIVB
Stage IV sporulation protein B.
 
     0.806
spoIIE
Serine phosphatase stage II sporulation protein E.
  
   
 0.803
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.