Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
spoIIIACStage III sporulation protein AC. (68 aa)    
Predicted Functional Partners:
spoIIIAB
Stage III sporulation protein AB.
 
  
 0.993
spoIIIAD
Stage III sporulation protein AD.
 
  
 0.986
spoIIIAA
Stage III sporulation protein AA.
 
  
 0.983
spoIIIAE
Stage III sporulation protein AE.
 
  
 0.982
spoIIIAF
Stage III sporulation protein AF.
 
  
 0.954
spoIIIAG
Stage III sporulation protein AG.
 
  
 0.942
spoIIID
Stage III sporulation protein D.
  
  
 0.941
spoIIIAH
Stage III sporulation protein AH.
 
  
 0.899
ABC2479
Conserved hypothetical protein.
 
    0.887
ABC0096
Conserved hypothetical protein.
  
  
 0.871
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.