STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC2486Esterase. (301 aa)    
Predicted Functional Partners:
spoIIIAH
Stage III sporulation protein AH.
  
     0.624
mntR
Manganese transport regulator; Central regulator of manganese homeostasis. Belongs to the DtxR/MntR family.
       0.603
sspI
Small acid-soluble spore protein; Belongs to the SspI family.
  
     0.599
cwlJ
Cell wall hydrolase.
  
     0.578
rsfA
Prespore specific transcriptional activator RsfA.
  
     0.576
ABC0806
Conserved hypothetical protein.
  
     0.559
gerD
Spore germination protein.
  
     0.534
ABC2497
Conserved hypothetical protein.
  
     0.525
cotE
Spore coat protein E.
  
     0.504
spoIIIAF
Stage III sporulation protein AF.
  
     0.495
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.