STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
comGCLate competence protein ComGC; Required for transformation and DNA binding. (104 aa)    
Predicted Functional Partners:
comGB
Late competence protein ComGB.
 
  
 0.917
ABC2503
Hypothetical protein.
  
  
 0.916
comGA
Late competence protein ComGA.
 
  
 0.901
comC
Late competence protein ComC.
 
  
 0.879
comFA
Late competence protein ComFA.
 
  
 0.841
ABC2504
Hypothetical protein.
       0.800
comEC
Late competence protein ComEC.
  
  
 0.732
comEA
Late competence protein ComEA.
   
  
 0.684
ABC2501
Conserved hypothetical protein.
  
    0.663
ABC2506
Conserved hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.
       0.561
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.