comGB protein (Bacillus clausii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

comGB

Late competence protein ComGB. (345 aa)

Predicted Functional Partners:

comGA

0.998

comGC

0.917

comC

0.911

ABC2503

0.859

comEA

0.822

comEC

0.800

comFA

0.734

ssb

0.613

ABC2509

0.596

ABC2848

0.594

Your Current Organism:

Bacillus clausii

NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABC2503	comC	ABC2503	ABC2619	Hypothetical protein.	Late competence protein ComC.	0.561
ABC2503	comEC	ABC2503	ABC1648	Hypothetical protein.	Late competence protein ComEC.	0.654
ABC2503	comFA	ABC2503	ABC3084	Hypothetical protein.	Late competence protein ComFA.	0.488
ABC2503	comGA	ABC2503	ABC2508	Hypothetical protein.	Late competence protein ComGA.	0.829
ABC2503	comGB	ABC2503	ABC2507	Hypothetical protein.	Late competence protein ComGB.	0.859
ABC2503	comGC	ABC2503	ABC2505	Hypothetical protein.	Late competence protein ComGC; Required for transformation and DNA binding.	0.916
ABC2509	comGA	ABC2509	ABC2508	UvrD/REP family ATP-dependent DNA helicase.	Late competence protein ComGA.	0.575
ABC2509	comGB	ABC2509	ABC2507	UvrD/REP family ATP-dependent DNA helicase.	Late competence protein ComGB.	0.596
ABC2848	comEA	ABC2848	ABC1646	Single-strand DNA-binding protein.	Late competence protein ComEA.	0.490
ABC2848	comEC	ABC2848	ABC1648	Single-strand DNA-binding protein.	Late competence protein ComEC.	0.457
ABC2848	comFA	ABC2848	ABC3084	Single-strand DNA-binding protein.	Late competence protein ComFA.	0.507
ABC2848	comGA	ABC2848	ABC2508	Single-strand DNA-binding protein.	Late competence protein ComGA.	0.576
ABC2848	comGB	ABC2848	ABC2507	Single-strand DNA-binding protein.	Late competence protein ComGB.	0.594
ABC2848	ssb	ABC2848	ABC4106	Single-strand DNA-binding protein.	Single-strand DNA-binding protein SSB; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.	0.909
comC	ABC2503	ABC2619	ABC2503	Late competence protein ComC.	Hypothetical protein.	0.561
comC	comEA	ABC2619	ABC1646	Late competence protein ComC.	Late competence protein ComEA.	0.707
comC	comEC	ABC2619	ABC1648	Late competence protein ComC.	Late competence protein ComEC.	0.776
comC	comFA	ABC2619	ABC3084	Late competence protein ComC.	Late competence protein ComFA.	0.533
comC	comGA	ABC2619	ABC2508	Late competence protein ComC.	Late competence protein ComGA.	0.898
comC	comGB	ABC2619	ABC2507	Late competence protein ComC.	Late competence protein ComGB.	0.911