STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
comGBLate competence protein ComGB. (345 aa)    
Predicted Functional Partners:
comGA
Late competence protein ComGA.
 
 
 0.999
comGC
Late competence protein ComGC; Required for transformation and DNA binding.
 
  
 0.991
comC
Late competence protein ComC.
 
  
 0.965
comEA
Late competence protein ComEA.
  
  
 0.913
comFA
Late competence protein ComFA.
   
  
 0.900
comEC
Late competence protein ComEC.
 
  
 0.869
ABC2503
Hypothetical protein.
  
  
 0.815
ssb
Single-strand DNA-binding protein SSB; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
 
    0.698
ABC2848
Single-strand DNA-binding protein.
 
    0.683
ABC2509
UvrD/REP family ATP-dependent DNA helicase.
  
  
 0.633
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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