STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC2511Spore coat protein. (193 aa)    
Predicted Functional Partners:
ABC1879
Conserved hypothetical protein.
  
    0.756
ABC3729
Conserved hypothetical protein.
  
     0.644
ABC4052
Hypothetical protein.
  
     0.643
ABC0592
Conserved hypothetical protein.
  
     0.607
ABC0496
Conserved hypothetical protein.
  
     0.573
ABC0212
Conserved hypothetical protein.
  
     0.554
ABC3828
Conserved hypothetical protein.
  
     0.541
ABC3619
Hypothetical protein.
  
     0.523
ABC2512
Hypothetical protein.
       0.522
ABC0593
Xre family transcriptional regulator.
  
     0.518
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.