STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC2533HAD superfamily hydrolase. (179 aa)    
Predicted Functional Partners:
ABC2726
Conserved hypothetical protein.
  
     0.718
ABC2421
Lipoprotein.
 
     0.713
ABC1718
Conserved hypothetical protein.
 
   
 0.711
ABC2532
Hemolysin.
       0.704
ABC2638
Conserved hypothetical protein.
  
     0.704
ABC3838
Conserved hypothetical protein.
 
     0.646
ABC2531
Conserved hypothetical protein.
 
     0.634
spo0B
Stage 0 sporulation protein B.
  
    0.613
ABC1719
Conserved hypothetical protein.
  
     0.602
ABC2536
Conserved hypothetical protein; Belongs to the UPF0736 family.
  
     0.595
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.