STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC2559Conserved hypothetical protein. (294 aa)    
Predicted Functional Partners:
ctaF
Cytochrome caa3 oxidase subunit IV CoxD.
 
  
 0.922
ctaC
Cytochrome caa3 oxidase subunit II CoxB; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
  
 0.848
qcrC
Menaquinol-cytochrome c reductase cytochrome b/c subunit; Component of the menaquinol-cytochrome c reductase complex.
 
  
 0.818
ABC1691
Cytochrome c551.
 
  
 0.817
ctaE
Cytochrome caa3 oxidase subunit III CoxC.
 
  
 0.804
cccB
Cytochrome c551.
 
  
 0.793
ABC1881
Conserved hypothetical protein.
  
     0.772
ABC2387
Conserved hypothetical protein.
  
     0.772
ABC2500
Conserved hypothetical protein.
  
     0.772
kbaA
KinB signaling pathway activation protein; Involved in the activation of the KinB signaling pathway of sporulation.
  
     0.770
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.