STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC2592Conserved hypothetical protein. (158 aa)    
Predicted Functional Partners:
ABC0280
Conserved hypothetical protein.
  
     0.550
ABC2593
Amidase; Belongs to the amidase family.
       0.525
ABC1151
Conserved hypothetical protein.
  
     0.513
ABC1095
Conserved hypothetical protein.
  
     0.501
ABC1980
Conserved hypothetical protein.
  
     0.453
ABC2090
Conserved hypothetical protein.
  
   
 0.429
pstS
Phosphate ABC transporter substrate-binding protein.
       0.429
ABC1482
Conserved hypothetical protein.
  
     0.422
ABC1020
Conserved hypothetical protein.
  
     0.417
ABC2594
Glutamine amidotransferase.
       0.416
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.