STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spoIVFBStage IV sporulation protein FB. (281 aa)    
Predicted Functional Partners:
spoIVFA
Stage IV sporulation protein FA.
 
  
 0.973
spoIIP
Stage II sporulation protein P; Septal wall dissolution protein.
  
  
 0.758
spoIIIAB
Stage III sporulation protein AB.
  
  
 0.738
spoIIM
Stage II sporulation protein M; Required for complete septum migration and engulfment of the forespore compartment during sporulation. Required for stabilizing and recruiting of SpoIIP to the septal membrane.
 
  
 0.735
spmB
Spore maturation protein B.
  
  
 0.715
bofA
Inhibition of the pro-sigma-K processing machinery.
  
  
 0.713
spmA
Spore maturation protein A.
  
  
 0.711
spoVB
Stage V sporulation protein B.
  
  
 0.709
cotE
Spore coat protein E.
  
   
 0.690
spoVR
Stage V sporulation protein R.
  
  
 0.674
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.