STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
comCLate competence protein ComC. (239 aa)    
Predicted Functional Partners:
comGB
Late competence protein ComGB.
 
  
 0.965
comGA
Late competence protein ComGA.
 
 
 0.959
comGC
Late competence protein ComGC; Required for transformation and DNA binding.
 
  
 0.929
comEC
Late competence protein ComEC.
 
  
 0.887
comEA
Late competence protein ComEA.
   
  
 0.867
ABC2279
Smf family DNA processing protein.
 
  
 0.848
ABC2618
Hypothetical protein.
     
 0.737
comFA
Late competence protein ComFA.
   
  
 0.705
ABC2526
Competence protein/transcription factor.
   
  
 0.680
cinA
Competence/damage-inducible protein CinA; Belongs to the CinA family.
     
 0.665
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.