Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABC0615 | ABC0617 | ABC0615 | ABC0617 | uroporphyrin-III C-methyltransferase. | Siroheme synthase. | 0.998 |
ABC0615 | gsaB | ABC0615 | ABC1318 | uroporphyrin-III C-methyltransferase. | Glutamate-1-semialdehyde 2,1-aminomutase. | 0.832 |
ABC0615 | hemA | ABC0615 | ABC2632 | uroporphyrin-III C-methyltransferase. | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.914 |
ABC0615 | hemB | ABC0615 | ABC2628 | uroporphyrin-III C-methyltransferase. | Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | 0.991 |
ABC0615 | hemC | ABC0615 | ABC2630 | uroporphyrin-III C-methyltransferase. | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.999 |
ABC0615 | hemD | ABC0615 | ABC2629 | uroporphyrin-III C-methyltransferase. | Uroporphyrinogen III cosynthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | 0.984 |
ABC0615 | hemL | ABC0615 | ABC2627 | uroporphyrin-III C-methyltransferase. | Glutamate-1-semialdehyde 2,1-aminomutase. | 0.843 |
ABC0615 | hemX | ABC0615 | ABC2631 | uroporphyrin-III C-methyltransferase. | Negative effector of the concentration of HemA. | 0.764 |
ABC0615 | nasF | ABC0615 | ABC1620 | uroporphyrin-III C-methyltransferase. | uroporphyrin-III C-methyltransferase. | 0.772 |
ABC0617 | ABC0615 | ABC0617 | ABC0615 | Siroheme synthase. | uroporphyrin-III C-methyltransferase. | 0.998 |
ABC0617 | gsaB | ABC0617 | ABC1318 | Siroheme synthase. | Glutamate-1-semialdehyde 2,1-aminomutase. | 0.524 |
ABC0617 | hemA | ABC0617 | ABC2632 | Siroheme synthase. | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.688 |
ABC0617 | hemB | ABC0617 | ABC2628 | Siroheme synthase. | Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | 0.703 |
ABC0617 | hemC | ABC0617 | ABC2630 | Siroheme synthase. | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.767 |
ABC0617 | hemD | ABC0617 | ABC2629 | Siroheme synthase. | Uroporphyrinogen III cosynthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | 0.532 |
ABC0617 | hemL | ABC0617 | ABC2627 | Siroheme synthase. | Glutamate-1-semialdehyde 2,1-aminomutase. | 0.534 |
ABC0617 | nasF | ABC0617 | ABC1620 | Siroheme synthase. | uroporphyrin-III C-methyltransferase. | 0.971 |
gluQ | hemA | ABC0263 | ABC2632 | glutamyl-tRNA synthetase; Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5-dihydroxy-2- cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon; Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily. | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.916 |
gsaB | ABC0615 | ABC1318 | ABC0615 | Glutamate-1-semialdehyde 2,1-aminomutase. | uroporphyrin-III C-methyltransferase. | 0.832 |
gsaB | ABC0617 | ABC1318 | ABC0617 | Glutamate-1-semialdehyde 2,1-aminomutase. | Siroheme synthase. | 0.524 |
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