STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC2638Conserved hypothetical protein. (352 aa)    
Predicted Functional Partners:
divIC
Cell-division initiation protein.
 
    0.772
hpr
Transcriptional repressor of sporulation and extracellular protein; Negative regulator of protease production and sporulation.
 
  
 0.768
ABC1600
Hypothetical protein.
  
     0.765
ABC3906
Conserved hypothetical protein.
  
     0.760
erzA
Negative regulator of FtsZ ring formation.
  
     0.741
ABC2399
Conserved hypothetical protein.
  
     0.738
ABC1471
Conserved hypothetical protein.
  
     0.722
ABC2771
Conserved hypothetical protein; Belongs to the UPF0354 family.
 
    0.722
fliL
Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
    0.721
ABC1879
Conserved hypothetical protein.
  
     0.720
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.