STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC2648Hypothetical protein. (499 aa)    
Predicted Functional Partners:
ABC1051
Conserved hypothetical protein.
 
     0.608
cotA
Spore coat protein.
 
   
 0.576
ABC3638
Conserved hypothetical protein.
 
     0.557
ABC3672
Hypothetical protein.
  
    0.531
ABC1791
Polysaccharide deacetylase.
  
  
 0.512
ABC0509
Conserved hypothetical protein.
  
 
 0.473
ABC1904
Conserved hypothetical protein.
  
 
 0.453
ABC2094
Conserved hypothetical protein.
  
     0.449
ABC2992
ABC transporter substrate-binding protein.
  
     0.447
ABC3221
Conserved hypothetical protein; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.
  
     0.435
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.