Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABC2665Na+-transporting ATP synthase. (451 aa)    
Predicted Functional Partners:
ABC0285
Trk family potassium transport system NAD-binding component.
 
 
 0.989
ABC2426
Trk family potassium transport system NAD-binding component.
 
 
 0.985
ABC2317
RNA-binding protein Sun; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
  
 0.701
ABC2666
Conserved hypothetical protein.
       0.683
sdhC
Succinate dehydrogenase cytochrome b558 subunit.
       0.531
sdhB
Succinate dehydrogenase iron-sulfur protein.
       0.485
sms
DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.
     
 0.450
mrpA
Multiple resistance and pH regulation related protein MrpA.
     
 0.447
ABC1635
Multiple resistance and pH regulation related protein MrpG.
     
 0.447
fliH
Flagellar assembly protein FliH.
     
 0.422
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.