STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC2665Na+-transporting ATP synthase. (451 aa)    
Predicted Functional Partners:
ABC0285
Trk family potassium transport system NAD-binding component.
 
 
 0.974
ABC2426
Trk family potassium transport system NAD-binding component.
 
 
 0.967
ABC2666
Conserved hypothetical protein.
       0.573
ABC2317
RNA-binding protein Sun; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
  
 0.505
sdhC
Succinate dehydrogenase cytochrome b558 subunit.
       0.482
atpB
F0F1-type ATP synthase A chain; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.
  
  
 0.448
ABC1010
Monovalent cation:H+ antiporter; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.
   
 
 0.438
sdhB
Succinate dehydrogenase iron-sulfur protein.
       0.430
mrpA
Multiple resistance and pH regulation related protein MrpA.
     
 0.428
ABC1635
Multiple resistance and pH regulation related protein MrpG.
     
 0.428
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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